Comparison of glutenin subunit composition among Australian and North American wheat classes
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Transcript of Comparison of glutenin subunit composition among Australian and North American wheat classes
Comparison of glutenin subunit composition among
Australian and North American wheat classes
Tatsuya M. Ikeda and Kanenori Takata
池田 達哉、高田 兼則
National Agriculture and Food Research Organization (NARO)
Western Agricultural Research Center, JAPAN
農研機構(NARO)近畿中国四国農業研究中心
日本、広島
Classification of HMW-GS alleles
Glu-B1
Payne & Lawrence 1983
12
2
7
8
12
2
7
8
12
2
7
8
12
2 3 4 5 2
2.2
12 12 10 10
12
7 7 7
8 8 9
6
20 13 16 19
13 14 15 17
18
21
22
1 2*
a b c
a b c d e f g h i j k
a b c d e f
Glu-A1
Glu-D1
null
Classification of LMW-GS alleles
a f g f b c d f f c f g
a j g h b h b j ad ac m g
a b c c b b a a c b c b
Glu-A3
Glu-B3
Glu-D3
Ikeda et al. IWGS (2008)
International collaboration has been going on to unify Glu-3 alleles.
Ikeda et al. Int. Wheat Genet Symp O42 (2008)
Ikeda et al. Int. Wheat Conference. (2010)
Liu et al. BMC Plant Biology 10:124 (2010)
Identification methods for Glu-3 alleles
and a temporal standard cultivar set
Glu-D1d
(Extra cysteine = tighter network)
Glu-A1c, Glu-A3e
(null type = less network)
Glu-A3d, Glu-B3g
(over-expression = more network)
Effect of glutenin alleles on gluten network
Wild-type
Effect of Glu-1 alleles on gluten strength
Gluten
strength Glu-1 allele
Glu-A1 Glu-B1 Glu-D1
Strong 7OE+8 (al) 5+10 (d)
13+16 (f), 17+18 (i)
1 (a), 2* (b) 7+8 (b/u), 2+12 (a), 3+12 (b)
7+9 (c)
Weak null (c) 7 (a), 6+8 (d), 20 (e)
6.1 (bl) 4+12 (c)
Based on Payne (1987)
Gluten
strength Glu-3 allele
Glu-A3 Glu-B3 Glu-D3
Strong g
d b, ab
a, b, c d, h, i a, b, c, d, f
Weak f c l?
e j
Effect of Glu-3 alleles on gluten strength
Glutenin subunit combination and gluten strength
Strong
Weak Strong
Glu-3 (LMW-GS)
Glu-1
(HMW-GS)
Glu-A3d
Glu-B3b
Glu-D1d
Glu-B3g Glu-A3e/f
Glu-B3h Glu-A3e/f
Glu-B3j
Glu-D1a
Glu-A1c
Glu-B1a
Extra strong Strong
Medium
Weak
Glu-B1al/Glu-D1d
Australian & North American wheat classes
Class Protein Usage
APH (Australian Prime Hard) ~13% Yellow alkaline noodle
ASW (Australian Standard White) ~10.5% White-salted noodle
CWRS (1CW)
(Canada Western Red Spring) ~13.5% Best for Pullman-type bread
DNS (Dark Northern Spring) ~14.0% Bread & Yellow alkaline noodle
HRW (Hared Red Winter) ~11.5% Bread & Yellow alkaline noodle
WW (Western White) ~10% Cake & Cookie
Each class blending various cultivars for specific usage.
Background & Objectives
• Each wheat classes blended various cultivars for particular usages.
• Studying glutenin compositions of these classes should help us to
understand the relationships with their usages.
• But, commercial cultivars are not available through seed banks.
Materials & Methods
• 60 seeds of wheat classes imported into Japan in 2009.
• Isolating DNA and protein from individual seeds.
• Identifying glutenin alleles by PCR markers, SDS-PAGE and 2D
electrophoresis.
DNS HRW
SDS-PAGE analysis of glutenin fractions
of wheat classes
HMW-GS
LMW-GS
& gliadins
ASW(N)
SDS-PAGE condition according to Dr.R.J.Peña
H 6 D a
3 7
5 0
p k
IEF pH10
3 3
8/9 10
4
2 1 5
11 3
3
8/9 10
4
1 5
11
H 6 p IEF pH10
HRW DNS
Glu-A3b, Glu-B3b, Glu-D3c Glu-A3d, Glu-B3h, Glu-D3a
Combination of PCR, SDS-PAGE, 2DE and N-terminal sequencing.
2
Glu-3 allele identification
3
12 12
Ikeda et al. (2006)
Observed number of allelic combination
= minimum number of cultivars consisting of each class
0
5
10
15
20
25
30
35
APH ASW ASWN 1CW DNS HRW WW
Glutenin subunit composition
Glu-A1 Glu-B1
0%
25%
50%
75%
100%
1CW DNS HRW PH ASW WWa b c new
Glutenin subunit composition
Glu-D1 Glu-A3
Glu-3 subunit composition
Glu-B3 Glu-D3
The new Glu-A1 allele was found in an ASWN cultivar, Calingiri.
Identification of a new Glu-A1 alleles in ASWN
a b b
a b new new new
H 6 p IEF pH10
Glu-A3d* was not found before.
Glu-D3f was found in Cheyenne (Ikeda et al. 2006)
3 3
8/9 10
4
2 1 5
11
Glu-A3d*, Glu-B3ab, Glu-D3f
3
12 12
Identification of a new Glu-3 alleles in HRW
d d*
f
H 6 p IEF pH10
A new Glu-B3 allele (Glu-B3ae) was found among club wheats and
expresses less amount of LMW-GS
3
8/9
10
4 2 1 5
12
Glu-A3c, Glu-B3ae, Glu-D3c
Identification of a new Glu-3 alleles in WW
Glutenin subunit combination and gluten strength
Strong
Weak Strong
Glu-3 (LMW-GS)
Glu-1
(HMW-GS)
Glu-A3d
Glu-B3b
Glu-D1d
Glu-B3g Glu-A3e
Glu-B3j
Glu-D1a
Glu-A1c
Glu-B1a
Extra strong Strong
Medium
Weak
Glu-B1al/Glu-D1d
Glu-A3e/f
Glu-B3h
Glutenin subunit combination and gluten strength
Strong
Weak Strong
Glu-3 (LMW-GS)
Glu-1
(HMW-GS)
Glu-A3d
Glu-B3b
Glu-D1d
Glu-B3g Glu-A3e
Glu-B3j
Glu-D1a
Glu-A1c
Glu-B1a
Extra strong Strong
Medium
Weak
Glu-B1al/Glu-D1d DNS
1CW HRW
WW
ASW
APH
Club
Glu-A3e/f
Glu-B3h
Strong
Weak Strong
Blending
(>12%) Pullman-type bread(11.5~13.5%)
Noodle (8.0~12.5%)
Cake & Cookies (<10%)
Glu-3
Glu-1
Wheat breeding targets
Yellow alkaline
noodle
European
bread
Glu-D1d
Glu-D1a
Glu-A1c
Glu-B1a
Glu-B1al/Glu-D1d
Glu-A3d
Glu-B3b
Glu-B3g Glu-B3h Glu-A3e
Glu-B3j
• Glutenin compositions of each class appear to reflect end-use properties.
• Most of winter wheat classes (HRW, ASW) have glutenin composition
expected to increase gluten strength, which might compensate relatively
lower protein content.
• Majority of APH lacked Glu-D1d allele. It might suitable for the texture of
yellow alkaline noodle.
• Most of WW lacked one (not two) of HMW-GSs. Club wheat also
contains a unique Glu-B3 allele (Glu-B3ae). These compositions might
be suitable for cake and cookie making.
• It is necessary to clarify the effect of gliadin allele compositions on
gluten properties (extensibility). We need recombinant lines breaking
Glu-3/Gli-1 linkages (e.g. Glu-B3h/Gli-B1d).
Results & Discussion
Further international collaboration
for gluten research
Proposal of International Gluten Research Group as a
part of IRIWI (International Research Initiative for
Wheat Improvement)
Unifying the nomenclature of gluten protein alleles and the
standard methods to examine gluten proteins.
Exchanging and sharing valuable wheat cultivars.
Studying the usefulness of particular gluten compositions for
quality under various environmental conditions.
Development of wheat cultivars with specific grain quality
attributes under different environmental conditions, including
heat and drought stresses.
Activities
Goals
We need further collaboration
Thank you!